Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm5139-201ENSMUST00000175943 249 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm24465-201ENSMUST00000178398 107 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm42522-201ENSMUST00000196071 255 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Mir6994-201ENSMUST00000198985 73 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm7733-201ENSMUST00000199038 919 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm44615-201ENSMUST00000206548 358 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm45247-201ENSMUST00000210757 309 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm6474-201ENSMUST00000223250 699 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm25799-201ENSMUST00000082643 107 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Mir133b-201ENSMUST00000083546 119 ntBASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm29071-201ENSMUST00000185729 1488 ntTSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm28771-202ENSMUST00000189399 1499 ntTSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Ddx55Q6ZPL9 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm13866-201ENSMUST00000118901 968 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm12189-201ENSMUST00000119779 912 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm29072-201ENSMUST00000191149 678 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm37751-201ENSMUST00000192440 1198 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm43774-201ENSMUST00000196327 878 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm7181-201ENSMUST00000202197 434 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm44954-201ENSMUST00000208513 227 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 AC159476.2-201ENSMUST00000216221 418 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.84□□□□□ -1.31
Ddx55Q6ZPL9 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Ddx55Q6ZPL9 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.84□□□□□ -1.32
Ddx55Q6ZPL9 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.84□□□□□ -1.32
Ddx55Q6ZPL9 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Gm15394-201ENSMUST00000119656 1308 ntBASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ddx55Q6ZPL9 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms