Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm8501-201ENSMUST00000117684 432 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm12985-201ENSMUST00000118376 183 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm13998-201ENSMUST00000120952 335 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm25219-201ENSMUST00000157545 330 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm18415-201ENSMUST00000177464 647 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm28973-201ENSMUST00000189310 613 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm8009-201ENSMUST00000191672 436 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm37358-201ENSMUST00000195492 479 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm43104-201ENSMUST00000197234 311 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm6850-201ENSMUST00000210031 530 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 AC122290.1-201ENSMUST00000225631 1078 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 AC154618.2-201ENSMUST00000228299 452 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.08□□□□□ -1.44
Sp140Q6NSQ5 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm24272-201ENSMUST00000102329 98 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm13768-201ENSMUST00000116469 929 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm14388-201ENSMUST00000118119 477 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm13493-201ENSMUST00000120318 493 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm15596-201ENSMUST00000121139 784 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm13502-201ENSMUST00000121574 684 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm13669-201ENSMUST00000122366 457 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm17061-201ENSMUST00000163167 499 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm2966-201ENSMUST00000166052 481 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm17204-201ENSMUST00000167936 478 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm3242-201ENSMUST00000171273 485 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Mir7212-201ENSMUST00000184098 61 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm27193-201ENSMUST00000184217 586 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm27348-201ENSMUST00000184511 170 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm28149-201ENSMUST00000187102 378 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm28768-201ENSMUST00000189034 378 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm35570-201ENSMUST00000198730 681 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm43233-201ENSMUST00000200491 616 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm44108-201ENSMUST00000203525 422 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm6702-201ENSMUST00000208496 471 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm45608-201ENSMUST00000210948 389 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 Gm7688-201ENSMUST00000212857 337 ntBASIC6.07□□□□□ -1.44
Sp140Q6NSQ5 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms