Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm9836-201ENSMUST00000117132 216 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm13311-201ENSMUST00000117863 379 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm7745-201ENSMUST00000182235 973 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm28975-201ENSMUST00000186412 686 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm45026-201ENSMUST00000205292 833 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm7887-201ENSMUST00000056948 537 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm10540-201ENSMUST00000097581 276 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.64□□□□□ -1.51
Trafd1Q3UDK1 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm15078-201ENSMUST00000118371 782 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm11852-201ENSMUST00000120806 222 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm12494-201ENSMUST00000121684 521 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm23662-201ENSMUST00000158046 111 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm26170-201ENSMUST00000158419 148 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm22530-201ENSMUST00000158820 118 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm23872-201ENSMUST00000175432 77 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm26607-201ENSMUST00000180661 867 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm27960-201ENSMUST00000183445 184 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm8581-201ENSMUST00000188636 890 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm37203-201ENSMUST00000191618 385 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm37609-201ENSMUST00000191778 678 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm42961-201ENSMUST00000202023 181 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm43946-201ENSMUST00000204058 886 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm45722-201ENSMUST00000213075 466 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 AC129323.1-201ENSMUST00000216733 470 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm17165-201ENSMUST00000096155 493 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Gm42676-201ENSMUST00000197609 2686 ntBASIC5.63□□□□□ -1.51
Trafd1Q3UDK1 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms