Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Gm45405-201ENSMUST00000211544 609 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Gm9088-201ENSMUST00000220237 508 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 AC154633.1-201ENSMUST00000223276 449 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 AC164597.1-201ENSMUST00000226538 514 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC6.02□□□□□ -1.45
Trim43aQ3TL54 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm9077-201ENSMUST00000210657 2298 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm12077-201ENSMUST00000117049 364 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm13114-201ENSMUST00000117605 106 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm28934-201ENSMUST00000186491 346 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm37503-201ENSMUST00000192088 319 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm19033-201ENSMUST00000208516 964 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm7499-201ENSMUST00000210423 813 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm8672-201ENSMUST00000221200 332 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm8526-201ENSMUST00000079153 475 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.01□□□□□ -1.45
Trim43aQ3TL54 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim43aQ3TL54 Fam107b-209ENSMUST00000226435 3602 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim43aQ3TL54 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim43aQ3TL54 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim43aQ3TL54 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim43aQ3TL54 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm44695-201ENSMUST00000205567 1631 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim43aQ3TL54 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Trim43aQ3TL54 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm25917-201ENSMUST00000104267 130 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm7931-201ENSMUST00000121537 271 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm12110-201ENSMUST00000121601 579 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm15877-201ENSMUST00000121897 964 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6□□□□□ -1.45
Trim43aQ3TL54 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm15257-201ENSMUST00000177680 883 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm15252-201ENSMUST00000177750 883 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm15256-201ENSMUST00000177793 883 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm15260-201ENSMUST00000179402 883 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Vis1-201ENSMUST00000183957 201 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm37485-201ENSMUST00000192326 2953 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm37430-201ENSMUST00000193039 196 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm37336-202ENSMUST00000193705 468 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm42886-201ENSMUST00000199214 466 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Gm45485-201ENSMUST00000211229 357 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim43aQ3TL54 AC153505.2-201ENSMUST00000217741 277 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6□□□□□ -1.45
Trim43aQ3TL54 AC166574.3-201ENSMUST00000226725 367 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 AC137117.1-201ENSMUST00000226912 441 ntBASIC6□□□□□ -1.45
Trim43aQ3TL54 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms