Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
PrkdcP97313 Tmem74-201ENSMUST00000067469 3528 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
PrkdcP97313 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm14122-201ENSMUST00000122076 973 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm23954-201ENSMUST00000157213 353 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm26085-201ENSMUST00000157900 116 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm37495-201ENSMUST00000194590 264 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 AC158511.1-201ENSMUST00000223622 764 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PrkdcP97313 Aagab-201ENSMUST00000041551 5294 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm44667-201ENSMUST00000207632 3337 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm14606-201ENSMUST00000117078 1155 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm12186-201ENSMUST00000119050 945 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm6155-201ENSMUST00000173735 341 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm20453-201ENSMUST00000173968 226 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm28304-201ENSMUST00000185977 312 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm29256-201ENSMUST00000189094 312 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm28484-201ENSMUST00000190606 312 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm9512-201ENSMUST00000223112 497 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Olfr881-201ENSMUST00000074611 948 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Etv1-210ENSMUST00000161980 1939 ntTSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
PrkdcP97313 2700099C18Rik-204ENSMUST00000183133 1333 ntBASIC3.74□□□□□ -1.81
PrkdcP97313 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC3.74□□□□□ -1.81
PrkdcP97313 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm23274-201ENSMUST00000104056 130 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm14382-201ENSMUST00000117374 437 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm6884-201ENSMUST00000119318 615 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PrkdcP97313 Mir6337-201ENSMUST00000184194 105 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm44138-201ENSMUST00000204939 271 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm44603-201ENSMUST00000206820 367 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm42548-201ENSMUST00000202669 3933 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Rreb1-207ENSMUST00000128570 8436 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm14995-201ENSMUST00000117135 391 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm24961-201ENSMUST00000157918 184 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Gm26486-201ENSMUST00000158021 110 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm23816-201ENSMUST00000179617 132 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC3.73□□□□□ -1.81
PrkdcP97313 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC3.73□□□□□ -1.81
PrkdcP97313 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
PrkdcP97313 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Gm9685-201ENSMUST00000211275 538 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 AC183268.2-201ENSMUST00000214513 446 ntBASIC3.73□□□□□ -1.81
PrkdcP97313 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PrkdcP97313 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
PrkdcP97313 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms