Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Traf1P39428 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Traf1P39428 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
Traf1P39428 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.32
Traf1P39428 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Traf1P39428 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Traf1P39428 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 Gm15660-201ENSMUST00000118997 478 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Gm12005-201ENSMUST00000121451 379 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.77□□□□□ -1.33
Traf1P39428 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.77□□□□□ -1.33
Traf1P39428 Gm22530-201ENSMUST00000158820 118 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Gm3008-201ENSMUST00000160566 571 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Gm29124-201ENSMUST00000186576 452 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Gm8826-201ENSMUST00000193161 948 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Gm37355-201ENSMUST00000193345 606 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.77□□□□□ -1.33
Traf1P39428 Gm43945-201ENSMUST00000203595 754 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
Traf1P39428 Gm10709-201ENSMUST00000213318 480 ntBASIC6.77□□□□□ -1.33
Traf1P39428 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 Gm7042-201ENSMUST00000223027 384 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Traf1P39428 AC132260.2-201ENSMUST00000224482 344 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Traf1P39428 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.77□□□□□ -1.33
Traf1P39428 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Traf1P39428 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.77□□□□□ -1.33
Traf1P39428 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.77□□□□□ -1.33
Traf1P39428 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Traf1P39428 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 Gm14106-201ENSMUST00000119382 438 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm13245-201ENSMUST00000119646 260 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm12936-201ENSMUST00000121439 301 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm14679-201ENSMUST00000121536 722 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.76□□□□□ -1.33
Traf1P39428 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.76□□□□□ -1.33
Traf1P39428 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.76□□□□□ -1.33
Traf1P39428 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC6.76□□□□□ -1.33
Traf1P39428 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 Gm25363-201ENSMUST00000158850 245 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm2959-201ENSMUST00000169844 621 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 Vis1-201ENSMUST00000183957 201 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC6.76□□□□□ -1.33
Traf1P39428 Gm43215-201ENSMUST00000199108 252 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm19900-201ENSMUST00000207285 576 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 Gm4032-201ENSMUST00000210886 487 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC6.76□□□□□ -1.33
Traf1P39428 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 AC165092.4-201ENSMUST00000225025 679 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Traf1P39428 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Traf1P39428 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Traf1P39428 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Traf1P39428 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Traf1P39428 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.76□□□□□ -1.33
Traf1P39428 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Traf1P39428 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms