Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Lire1P11260 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Gm26422-201ENSMUST00000104276 132 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Gm11902-201ENSMUST00000118849 270 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm11584-201ENSMUST00000120636 325 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm25106-201ENSMUST00000122672 134 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.81□□□□□ -1.48
Lire1P11260 Gm4997-201ENSMUST00000154056 360 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm3076-201ENSMUST00000161613 451 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm20691-201ENSMUST00000176889 333 ntBASIC5.81□□□□□ -1.48
Lire1P11260 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lire1P11260 Gm1972-201ENSMUST00000181606 964 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.81□□□□□ -1.48
Lire1P11260 Gm9658-201ENSMUST00000182757 1012 ntBASIC5.81□□□□□ -1.48
Lire1P11260 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Mir6362-201ENSMUST00000184329 107 ntBASIC5.81□□□□□ -1.48
Lire1P11260 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm37493-201ENSMUST00000193167 433 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm43383-201ENSMUST00000195981 469 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm42625-201ENSMUST00000198611 922 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm8930-201ENSMUST00000201693 768 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Gm18600-201ENSMUST00000207205 505 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.81□□□□□ -1.48
Lire1P11260 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.81□□□□□ -1.48
Lire1P11260 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.81□□□□□ -1.48
Lire1P11260 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.81□□□□□ -1.48
Lire1P11260 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.81□□□□□ -1.48
Lire1P11260 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.81□□□□□ -1.48
Lire1P11260 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lire1P11260 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lire1P11260 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Lire1P11260 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Gm37238-201ENSMUST00000195552 2390 ntBASIC5.81□□□□□ -1.48
Lire1P11260 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Lire1P11260 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Lire1P11260 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.8□□□□□ -1.48
Lire1P11260 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Lire1P11260 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Lire1P11260 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Lire1P11260 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lire1P11260 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lire1P11260 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lire1P11260 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Lire1P11260 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Gm6893-201ENSMUST00000118385 522 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm13835-201ENSMUST00000118459 685 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm11504-201ENSMUST00000120211 173 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm14229-201ENSMUST00000121178 850 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm12444-201ENSMUST00000121512 877 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Lire1P11260 Gm25966-201ENSMUST00000157169 117 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm24441-201ENSMUST00000157235 281 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm26346-201ENSMUST00000157525 329 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm8895-201ENSMUST00000172300 1223 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Lire1P11260 Gm10074-201ENSMUST00000174543 249 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm25246-201ENSMUST00000175476 69 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Lire1P11260 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm21991-201ENSMUST00000180006 508 ntBASIC5.8□□□□□ -1.48
Lire1P11260 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC5.8□□□□□ -1.48
Lire1P11260 Gm29556-201ENSMUST00000187591 696 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms