Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm24886-201ENSMUST00000104384 123 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm22499-201ENSMUST00000104501 135 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm16007-201ENSMUST00000117837 286 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm5073-201ENSMUST00000118222 820 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm23280-201ENSMUST00000157905 139 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm22518-201ENSMUST00000158267 68 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm44370-201ENSMUST00000175436 112 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm6055-201ENSMUST00000180532 378 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm19060-201ENSMUST00000201959 421 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm18255-201ENSMUST00000211316 765 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Olfr767-202ENSMUST00000213579 5493 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Chmp6P0C0A3 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Chmp6P0C0A3 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.15□□□□□ -1.43
Chmp6P0C0A3 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Chmp6P0C0A3 AC153912.2-201ENSMUST00000215840 2015 ntBASIC6.15□□□□□ -1.43
Chmp6P0C0A3 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Chmp6P0C0A3 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm37060-201ENSMUST00000194997 2397 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm12189-201ENSMUST00000119779 912 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm7309-201ENSMUST00000121670 581 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm25342-201ENSMUST00000157459 122 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm24692-201ENSMUST00000157761 146 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm3076-201ENSMUST00000161613 451 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm20453-201ENSMUST00000173968 226 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm23631-201ENSMUST00000175291 123 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm16531-201ENSMUST00000180658 967 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm38181-201ENSMUST00000181357 720 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm29509-201ENSMUST00000185716 321 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Ighv1-44-201ENSMUST00000195597 352 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm42646-201ENSMUST00000202233 914 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm31861-201ENSMUST00000204563 672 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 AC159297.1-201ENSMUST00000218689 290 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Mir412-201ENSMUST00000083636 80 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Chmp6P0C0A3 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.14□□□□□ -1.43
Chmp6P0C0A3 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm13679-201ENSMUST00000118678 484 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm23279-201ENSMUST00000157912 97 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Gm23030-201ENSMUST00000158004 273 ntBASIC6.13□□□□□ -1.43
Chmp6P0C0A3 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms