Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm19113-201ENSMUST00000217552 1828 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm26340-201ENSMUST00000102365 99 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm23527-201ENSMUST00000104570 130 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm14115-201ENSMUST00000119242 482 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm15181-201ENSMUST00000120142 177 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm13899-201ENSMUST00000121519 1255 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm11609-201ENSMUST00000121926 793 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm23888-201ENSMUST00000122690 253 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm18700-201ENSMUST00000185791 553 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm37503-201ENSMUST00000192088 319 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm38360-201ENSMUST00000195130 454 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm43396-201ENSMUST00000197506 706 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm44219-201ENSMUST00000203005 273 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm18839-201ENSMUST00000204292 670 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm19921-201ENSMUST00000210505 703 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm20786-201ENSMUST00000212649 436 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 AC154595.2-201ENSMUST00000225067 310 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 AC115735.5-201ENSMUST00000228386 397 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
Hmgb3O54879 n-R5s156-201ENSMUST00000083377 105 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm29486-201ENSMUST00000088648 372 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hmgb3O54879 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm42860-201ENSMUST00000196492 3991 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.52□□□□□ -1.69
Hmgb3O54879 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Hmgb3O54879 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Hmgb3O54879 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm45415-201ENSMUST00000209644 2074 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm12262-201ENSMUST00000119915 305 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm6977-201ENSMUST00000121568 512 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm12732-201ENSMUST00000121688 180 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm11879-201ENSMUST00000121885 702 ntBASIC4.51□□□□□ -1.69
Hmgb3O54879 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Hmgb3O54879 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms