Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.44□□□□□ -1.54
Trim3Q9R1R2 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.44□□□□□ -1.54
Trim3Q9R1R2 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.44□□□□□ -1.54
Trim3Q9R1R2 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Gm23624-201ENSMUST00000082463 321 ntBASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Trim3Q9R1R2 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Cyp4a32-201ENSMUST00000084342 1530 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm12077-201ENSMUST00000117049 364 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm15078-201ENSMUST00000118371 782 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm14115-201ENSMUST00000119242 482 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm14732-201ENSMUST00000121372 545 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm22361-201ENSMUST00000158435 176 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm2058-201ENSMUST00000178791 560 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm2539-203ENSMUST00000181352 746 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm28186-201ENSMUST00000187447 679 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm8241-201ENSMUST00000189286 816 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm43222-201ENSMUST00000199013 603 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Olfr1431-201ENSMUST00000072316 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Olfr192-201ENSMUST00000080251 925 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.43□□□□□ -1.54
Trim3Q9R1R2 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Gm6125-201ENSMUST00000217983 3472 ntBASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.42□□□□□ -1.54
Trim3Q9R1R2 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms