Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm18444-201ENSMUST00000191239 629 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm7166-201ENSMUST00000199715 303 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 AC154642.1-201ENSMUST00000224173 740 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 AC153532.2-201ENSMUST00000219753 3844 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 AC115910.1-201ENSMUST00000221188 4275 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Mir700-201ENSMUST00000102169 79 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm13641-201ENSMUST00000117993 473 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm14783-201ENSMUST00000118900 663 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm26410-201ENSMUST00000157670 261 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm28527-201ENSMUST00000185210 297 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm5735-201ENSMUST00000207053 167 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm36262-201ENSMUST00000223274 499 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Lima1Q9ERG0 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm12732-201ENSMUST00000121688 180 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm12488-201ENSMUST00000122449 499 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm24733-201ENSMUST00000158863 253 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm22852-201ENSMUST00000177899 101 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm37430-201ENSMUST00000193039 196 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm43392-201ENSMUST00000196560 434 ntBASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm40190-201ENSMUST00000196570 471 ntTSL 2 BASIC5.52□□□□□ -1.53
Lima1Q9ERG0 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms