Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm13489-201ENSMUST00000121234 971 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm12494-201ENSMUST00000121684 521 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm15275-201ENSMUST00000154752 347 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm26106-201ENSMUST00000157254 228 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm20453-201ENSMUST00000173968 226 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Mirt2-201ENSMUST00000175179 285 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Mir5125-201ENSMUST00000175240 79 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm3605-201ENSMUST00000185858 440 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm28066-201ENSMUST00000188657 472 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm9057-201ENSMUST00000198791 296 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm18689-201ENSMUST00000203969 902 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm19900-201ENSMUST00000207285 576 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm46192-201ENSMUST00000217894 326 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm5830-201ENSMUST00000049117 443 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm16335-201ENSMUST00000077495 309 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Mir143-201ENSMUST00000083511 63 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm10705-201ENSMUST00000098980 461 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm5594-201ENSMUST00000172712 1429 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Enpp2-202ENSMUST00000167541 2664 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Mir466j-201ENSMUST00000116876 122 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm8424-201ENSMUST00000117716 988 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm23250-201ENSMUST00000157444 267 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Mir1945-201ENSMUST00000157919 78 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm15970-201ENSMUST00000160623 834 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm21399-201ENSMUST00000180210 597 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm27849-201ENSMUST00000183673 125 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm44494-201ENSMUST00000196760 129 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm42776-201ENSMUST00000198031 406 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm43743-202ENSMUST00000198353 491 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm8930-201ENSMUST00000201693 768 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm44219-201ENSMUST00000203005 273 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm6477-201ENSMUST00000217098 764 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdc40Q9DC48 Anxa13-202ENSMUST00000227274 1201 ntBASIC5.35□□□□□ -1.55
Cdc40Q9DC48 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms