Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 AC105407.2-201ENSMUST00000223707 3911 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Tmem45a-201ENSMUST00000023435 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 AC153959.1-201ENSMUST00000213617 1694 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm11105-201ENSMUST00000112781 478 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Zfp389-201ENSMUST00000118425 675 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm15331-201ENSMUST00000120225 385 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm23250-201ENSMUST00000157444 267 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm21772-201ENSMUST00000169213 478 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm17126-201ENSMUST00000172276 523 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm3605-201ENSMUST00000185858 440 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm18255-201ENSMUST00000211316 765 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm18247-201ENSMUST00000222937 601 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm22300-201ENSMUST00000082661 126 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Mir375-201ENSMUST00000083682 64 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Smc1aQ9CU62 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.46□□□□□ -1.37
Smc1aQ9CU62 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.46□□□□□ -1.37
Smc1aQ9CU62 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Smc1aQ9CU62 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.46□□□□□ -1.37
Smc1aQ9CU62 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm14335-201ENSMUST00000119165 810 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm12399-201ENSMUST00000121475 446 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm23553-201ENSMUST00000157817 295 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Mir1945-201ENSMUST00000157919 78 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm38085-201ENSMUST00000195785 3062 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm5306-201ENSMUST00000203325 757 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm45405-201ENSMUST00000211544 609 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Gm4012-201ENSMUST00000221504 581 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 AC154527.1-201ENSMUST00000225809 242 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Smc1aQ9CU62 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms