Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm12073-201ENSMUST00000117382 524 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm15332-201ENSMUST00000118386 357 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm4234-201ENSMUST00000119747 714 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm15781-201ENSMUST00000120216 323 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm24687-201ENSMUST00000157758 241 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm24179-201ENSMUST00000158925 127 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm15257-201ENSMUST00000177680 883 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm15252-201ENSMUST00000177750 883 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm15256-201ENSMUST00000177793 883 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm15260-201ENSMUST00000179402 883 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm2539-203ENSMUST00000181352 746 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm17934-201ENSMUST00000192818 422 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm22897-202ENSMUST00000197782 127 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm44091-201ENSMUST00000205212 649 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 AC159819.1-201ENSMUST00000213911 328 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm10688-201ENSMUST00000214985 520 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm24454-201ENSMUST00000083349 132 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm37132-201ENSMUST00000195553 2238 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msh4Q99MT2 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msh4Q99MT2 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm9836-201ENSMUST00000117132 216 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm11821-201ENSMUST00000117335 979 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm14331-201ENSMUST00000120396 409 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm15719-201ENSMUST00000120619 635 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm11350-201ENSMUST00000121436 870 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msh4Q99MT2 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm25839-201ENSMUST00000158921 103 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Vmn1r-ps12-201ENSMUST00000176946 502 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm37708-201ENSMUST00000192337 895 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm18215-201ENSMUST00000204429 798 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm44623-201ENSMUST00000207934 434 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.79□□□□□ -1.48
Msh4Q99MT2 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msh4Q99MT2 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 123.3 ms