Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm43233-201ENSMUST00000200491 616 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm44108-201ENSMUST00000203525 422 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm8703-201ENSMUST00000203793 730 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 AC153522.1-201ENSMUST00000220047 1090 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm43216-201ENSMUST00000196295 1333 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Cstf3Q99LI7 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Zfp182-201ENSMUST00000040628 2487 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm12077-201ENSMUST00000117049 364 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm9208-201ENSMUST00000120468 948 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm15061-201ENSMUST00000121076 1046 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm8317-201ENSMUST00000121261 471 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm13531-201ENSMUST00000121893 543 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm24363-201ENSMUST00000158440 311 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm3344-201ENSMUST00000169610 603 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm23631-201ENSMUST00000175291 123 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm18006-201ENSMUST00000177411 662 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm21959-201ENSMUST00000178439 452 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm35013-201ENSMUST00000197218 832 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm43222-201ENSMUST00000199013 603 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm45008-201ENSMUST00000206420 493 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Gm19196-201ENSMUST00000209258 357 ntBASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC5.66□□□□□ -1.5
Cstf3Q99LI7 Olfr1077-ps1-201ENSMUST00000213225 1212 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms