Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm28926-201ENSMUST00000191063 680 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 CT025538.2-201ENSMUST00000226083 772 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm5612-201ENSMUST00000053326 375 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Olfr396-ps1-201ENSMUST00000143750 1675 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm18066-201ENSMUST00000210904 1774 ntBASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Brf1Q8CFK2 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Senp8-206ENSMUST00000216329 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 AC154755.2-201ENSMUST00000224384 2857 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm12465-201ENSMUST00000118591 300 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm14599-201ENSMUST00000120469 474 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm12293-201ENSMUST00000121898 590 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm25439-201ENSMUST00000158280 131 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm3715-201ENSMUST00000172308 617 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Mirt2-201ENSMUST00000175179 285 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm22932-201ENSMUST00000175510 72 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm10410-201ENSMUST00000180138 384 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm26898-201ENSMUST00000181678 384 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm28614-201ENSMUST00000186483 458 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm8930-201ENSMUST00000201693 768 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 AC124356.2-201ENSMUST00000221874 336 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm6068-201ENSMUST00000222270 387 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 AC129597.1-201ENSMUST00000223046 1234 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 AC154252.1-201ENSMUST00000226041 473 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 AC192088.2-201ENSMUST00000227590 411 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm43627-201ENSMUST00000197119 2299 ntBASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Brf1Q8CFK2 Gm44897-201ENSMUST00000206187 1341 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm43891-201ENSMUST00000205132 3112 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm11105-201ENSMUST00000112781 478 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm13428-201ENSMUST00000117540 365 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm14301-201ENSMUST00000120181 324 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm13121-201ENSMUST00000120637 632 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm14237-201ENSMUST00000122080 430 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm21772-201ENSMUST00000169213 478 ntBASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Brf1Q8CFK2 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms