Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37463-201ENSMUST00000193819 796 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm1969-201ENSMUST00000198125 1220 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm15741-201ENSMUST00000119401 754 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm22915-201ENSMUST00000157615 136 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm24179-201ENSMUST00000158925 127 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm21877-201ENSMUST00000185640 694 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm29664-201ENSMUST00000191125 463 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm18553-201ENSMUST00000194152 634 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm43105-201ENSMUST00000202987 459 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm44538-201ENSMUST00000205615 348 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 AC161252.1-201ENSMUST00000225536 467 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Ccdc28aQ8CEI3 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm2016-201ENSMUST00000110147 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm23440-201ENSMUST00000104299 130 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm14620-201ENSMUST00000120656 383 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm12890-201ENSMUST00000120885 373 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm23149-201ENSMUST00000158837 230 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm24733-201ENSMUST00000158863 253 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm16164-201ENSMUST00000160078 468 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm8185-201ENSMUST00000160999 669 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm28934-201ENSMUST00000186491 346 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37700-201ENSMUST00000192617 965 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37560-201ENSMUST00000194289 1000 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm44214-201ENSMUST00000204153 606 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm17992-201ENSMUST00000207346 1072 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 Gm45596-201ENSMUST00000209279 434 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 AC104906.1-201ENSMUST00000218122 913 ntBASIC5.8□□□□□ -1.48
Ccdc28aQ8CEI3 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms