Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm18871-201ENSMUST00000218655 745 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm18591-201ENSMUST00000220568 763 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm25818-201ENSMUST00000083282 164 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm29486-201ENSMUST00000088648 372 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43612-201ENSMUST00000196087 3207 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm45201-201ENSMUST00000207187 2679 ntBASIC5.61□□□□□ -1.51
Ccdc28bQ8CEG5 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm13768-201ENSMUST00000116469 929 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm14054-201ENSMUST00000120744 704 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm14679-201ENSMUST00000121536 722 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm24767-201ENSMUST00000158509 95 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8715-201ENSMUST00000162728 531 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm26557-201ENSMUST00000180756 493 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm4602-201ENSMUST00000203198 308 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm19212-201ENSMUST00000216642 862 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm272-201ENSMUST00000222073 919 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 AC115735.5-201ENSMUST00000228386 397 ntBASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Ccdc28bQ8CEG5 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm24869-201ENSMUST00000104072 128 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm13321-201ENSMUST00000117101 400 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm11902-201ENSMUST00000118849 270 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm15493-201ENSMUST00000119461 528 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm6977-201ENSMUST00000121568 512 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm12732-201ENSMUST00000121688 180 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm11879-201ENSMUST00000121885 702 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm23888-201ENSMUST00000122690 253 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm9671-201ENSMUST00000171502 547 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm21399-201ENSMUST00000180210 597 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Mir6987-201ENSMUST00000184789 73 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm37173-201ENSMUST00000194498 1017 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm38170-201ENSMUST00000195404 816 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm44319-201ENSMUST00000196974 93 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm43148-201ENSMUST00000198237 520 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm19095-201ENSMUST00000220533 730 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 AC124489.3-201ENSMUST00000224037 278 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.59□□□□□ -1.51
Ccdc28bQ8CEG5 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms