Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC118250.1-201ENSMUST00000228569 875 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm24029-201ENSMUST00000083928 143 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm44209-201ENSMUST00000204556 4153 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm24230-201ENSMUST00000104313 129 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm13473-201ENSMUST00000119289 367 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm11255-201ENSMUST00000120448 1180 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm14679-201ENSMUST00000121536 722 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm25962-201ENSMUST00000157173 168 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm24239-201ENSMUST00000157791 255 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm25489-201ENSMUST00000158727 141 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm5946-201ENSMUST00000182340 970 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm36378-201ENSMUST00000201709 388 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 AC112956.1-201ENSMUST00000213563 492 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm37897-201ENSMUST00000192613 3561 ntBASIC8.13□□□□□ -1.11
Usp40Q8BWR4 Gm37926-201ENSMUST00000191922 2424 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm21761-202ENSMUST00000187530 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm37943-201ENSMUST00000194053 3944 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm14606-201ENSMUST00000117078 1155 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28943-201ENSMUST00000186187 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28736-201ENSMUST00000186257 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm29401-201ENSMUST00000186690 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm29178-204ENSMUST00000186784 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28589-201ENSMUST00000186991 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28936-201ENSMUST00000187153 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm29121-201ENSMUST00000187611 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28243-201ENSMUST00000187801 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28844-202ENSMUST00000187977 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm29058-201ENSMUST00000189510 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm29624-201ENSMUST00000190018 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28780-201ENSMUST00000190223 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28467-201ENSMUST00000190981 318 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28969-211ENSMUST00000190992 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm28990-207ENSMUST00000191219 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm31123-201ENSMUST00000192094 666 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm36468-201ENSMUST00000192119 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm36999-201ENSMUST00000192756 1046 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm31572-201ENSMUST00000193341 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm30175-201ENSMUST00000194173 615 ntBASIC8.12□□□□□ -1.11
Usp40Q8BWR4 Gm30858-201ENSMUST00000195516 615 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms