Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Gm11677-201ENSMUST00000121349 977 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Gm11679-201ENSMUST00000121830 779 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Gm8358-201ENSMUST00000167222 555 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Gm8256-201ENSMUST00000169178 453 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Mir6986-201ENSMUST00000184483 58 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Gm19029-201ENSMUST00000189923 564 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Gm43629-201ENSMUST00000201782 704 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Gm45405-201ENSMUST00000211544 609 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 AC153961.1-201ENSMUST00000217760 385 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
Nup98Q6PFD9 AC165953.1-201ENSMUST00000226386 357 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Gm23459-201ENSMUST00000083259 131 ntBASIC6.6□□□□□ -1.35
Nup98Q6PFD9 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gm37051-201ENSMUST00000194535 2943 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gm13488-201ENSMUST00000120419 179 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gm7670-201ENSMUST00000121272 641 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gm17907-201ENSMUST00000173150 710 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gm4831-201ENSMUST00000174626 594 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Mir6400-201ENSMUST00000184870 92 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Clec2j-201ENSMUST00000032517 515 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Gm5321-201ENSMUST00000072050 447 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Nup98Q6PFD9 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Nup98Q6PFD9 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Nup98Q6PFD9 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm37854-201ENSMUST00000192149 1463 ntTSL 5 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 n-R5s174-201ENSMUST00000122638 121 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm20545-201ENSMUST00000174739 210 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Mir5103-201ENSMUST00000175111 79 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm8669-201ENSMUST00000183839 945 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm2914-201ENSMUST00000186120 328 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Gm2961-201ENSMUST00000211074 772 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Mir342-201ENSMUST00000083502 99 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nup98Q6PFD9 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm15766-201ENSMUST00000118025 813 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm43631-201ENSMUST00000202011 369 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm7688-201ENSMUST00000212857 337 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Robo2-210ENSMUST00000226478 8059 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Gm11912-201ENSMUST00000117235 264 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Mir7006-201ENSMUST00000183624 69 ntBASIC6.57□□□□□ -1.36
Nup98Q6PFD9 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nup98Q6PFD9 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms