Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm24741-201ENSMUST00000158857 106 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Mir7006-201ENSMUST00000183624 69 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm7624-201ENSMUST00000209702 435 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm7751-201ENSMUST00000212868 709 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm4556-201ENSMUST00000217808 355 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm9535-201ENSMUST00000218499 768 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 AL606472.1-201ENSMUST00000224628 275 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Snora21-201ENSMUST00000082967 137 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Rtel1-205ENSMUST00000108815 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Gm4991-201ENSMUST00000118899 1552 ntBASIC12.22□□□□□ -0.45
Trim41Q5NCC3 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trim41Q5NCC3 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Mir669g-201ENSMUST00000116809 123 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm12102-201ENSMUST00000118251 604 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm14018-201ENSMUST00000119042 455 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm14070-201ENSMUST00000120773 428 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm14638-201ENSMUST00000121338 216 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm20454-201ENSMUST00000172713 221 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Mir6926-201ENSMUST00000184562 68 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm28560-201ENSMUST00000186091 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm28334-201ENSMUST00000186653 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm28495-201ENSMUST00000188452 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm28232-201ENSMUST00000188683 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm28481-201ENSMUST00000189231 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm29059-201ENSMUST00000191534 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm37765-201ENSMUST00000192395 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm37237-201ENSMUST00000192893 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm36968-201ENSMUST00000193737 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm38290-201ENSMUST00000195238 315 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm44385-201ENSMUST00000198781 81 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm44225-201ENSMUST00000203582 186 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Gm43922-201ENSMUST00000205071 328 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 AC160999.1-201ENSMUST00000225675 810 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Mir106b-201ENSMUST00000083580 82 ntBASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim41Q5NCC3 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim41Q5NCC3 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim41Q5NCC3 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim41Q5NCC3 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trim41Q5NCC3 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim41Q5NCC3 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim41Q5NCC3 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim41Q5NCC3 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm12641-201ENSMUST00000117874 985 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm15126-201ENSMUST00000118631 833 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm13121-201ENSMUST00000120637 632 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm5287-201ENSMUST00000120666 598 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm15388-201ENSMUST00000121578 726 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm14530-201ENSMUST00000122391 333 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm25559-201ENSMUST00000157182 74 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm23229-201ENSMUST00000157297 105 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm25603-201ENSMUST00000158361 105 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm11107-201ENSMUST00000165414 505 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm9541-201ENSMUST00000188409 502 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm38237-201ENSMUST00000193366 376 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Gm2314-201ENSMUST00000200391 586 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC12.2□□□□□ -0.46
Trim41Q5NCC3 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms