Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CiitaP79621 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Gm38299-201ENSMUST00000193214 3789 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CiitaP79621 Gm44209-201ENSMUST00000204556 4153 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Gm37959-201ENSMUST00000191700 2897 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 Gm37435-201ENSMUST00000192078 3947 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CiitaP79621 Gm10936-201ENSMUST00000105264 252 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm9836-201ENSMUST00000117132 216 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm7189-201ENSMUST00000119811 429 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm16420-201ENSMUST00000120258 856 ntBASIC6.31□□□□□ -1.4
CiitaP79621 n-R5s201-201ENSMUST00000122622 116 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm22361-201ENSMUST00000158435 176 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm20453-201ENSMUST00000173968 226 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Mir3095-201ENSMUST00000175552 87 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm38122-201ENSMUST00000192679 885 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Gm43054-201ENSMUST00000199495 884 ntBASIC6.31□□□□□ -1.4
CiitaP79621 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.31□□□□□ -1.4
CiitaP79621 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.31□□□□□ -1.4
CiitaP79621 LOC665443-201ENSMUST00000212284 796 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC6.31□□□□□ -1.4
CiitaP79621 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 AC156802.1-201ENSMUST00000223623 579 ntBASIC6.31□□□□□ -1.4
CiitaP79621 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.31□□□□□ -1.4
CiitaP79621 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.31□□□□□ -1.4
CiitaP79621 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CiitaP79621 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CiitaP79621 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Gm25099-201ENSMUST00000093716 116 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
CiitaP79621 Zfp850-201ENSMUST00000099111 941 ntBASIC6.31□□□□□ -1.4
CiitaP79621 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CiitaP79621 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CiitaP79621 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CiitaP79621 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.3□□□□□ -1.4
CiitaP79621 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CiitaP79621 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CiitaP79621 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Gm26078-201ENSMUST00000104067 128 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CiitaP79621 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Gm25152-201ENSMUST00000157117 114 ntBASIC6.3□□□□□ -1.4
CiitaP79621 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.3□□□□□ -1.4
CiitaP79621 Gm3605-201ENSMUST00000185858 440 ntBASIC6.3□□□□□ -1.4
CiitaP79621 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.3□□□□□ -1.4
CiitaP79621 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.3□□□□□ -1.4
CiitaP79621 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.3□□□□□ -1.4
CiitaP79621 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.3□□□□□ -1.4
CiitaP79621 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Gm3800-201ENSMUST00000221086 554 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC6.3□□□□□ -1.4
CiitaP79621 AC154417.1-201ENSMUST00000223876 476 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Gm5087-204ENSMUST00000225820 645 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Gm17165-201ENSMUST00000096155 493 ntBASIC6.3□□□□□ -1.4
CiitaP79621 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
CiitaP79621 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CiitaP79621 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CiitaP79621 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CiitaP79621 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms