Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cux1P53564 Gm36814-201ENSMUST00000197457 1755 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cux1P53564 Gm11550-201ENSMUST00000118210 699 ntBASIC8.65□□□□□ -1.02
Cux1P53564 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cux1P53564 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC8.65□□□□□ -1.02
Cux1P53564 Gm22411-201ENSMUST00000175462 126 ntBASIC8.65□□□□□ -1.02
Cux1P53564 Gm22002-201ENSMUST00000175622 125 ntBASIC8.65□□□□□ -1.02
Cux1P53564 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cux1P53564 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cux1P53564 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC8.65□□□□□ -1.02
Cux1P53564 Gm45405-201ENSMUST00000211544 609 ntBASIC8.65□□□□□ -1.02
Cux1P53564 Supt4b-201ENSMUST00000214434 351 ntBASIC8.65□□□□□ -1.02
Cux1P53564 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC8.65□□□□□ -1.02
Cux1P53564 CT030182.2-201ENSMUST00000223569 620 ntBASIC8.65□□□□□ -1.02
Cux1P53564 CT010486.1-201ENSMUST00000224609 422 ntBASIC8.65□□□□□ -1.02
Cux1P53564 Gm23511-201ENSMUST00000083084 164 ntBASIC8.65□□□□□ -1.02
Cux1P53564 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cux1P53564 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cux1P53564 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC8.65□□□□□ -1.02
Cux1P53564 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cux1P53564 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cux1P53564 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cux1P53564 Gm28320-201ENSMUST00000187777 2273 ntBASIC8.65□□□□□ -1.02
Cux1P53564 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Cux1P53564 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.65□□□□□ -1.02
Cux1P53564 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cux1P53564 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cux1P53564 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cux1P53564 Gm44439-201ENSMUST00000203379 3592 ntBASIC8.65□□□□□ -1.03
Cux1P53564 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cux1P53564 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC8.65□□□□□ -1.03
Cux1P53564 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cux1P53564 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cux1P53564 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Cux1P53564 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cux1P53564 Gm22272-201ENSMUST00000104039 134 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC8.64□□□□□ -1.03
Cux1P53564 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 Gm17121-201ENSMUST00000170414 847 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Gm17222-201ENSMUST00000180135 847 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Cux1P53564 Gm28847-201ENSMUST00000186778 700 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm45082-201ENSMUST00000206082 601 ntBASIC8.64□□□□□ -1.03
Cux1P53564 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 AC113269.1-201ENSMUST00000227185 674 ntBASIC8.64□□□□□ -1.03
Cux1P53564 AC161383.1-201ENSMUST00000227356 527 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Cux1P53564 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
Cux1P53564 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC8.64□□□□□ -1.03
Cux1P53564 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm11759-201ENSMUST00000121742 464 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Gm7973-201ENSMUST00000122107 488 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Gm12317-201ENSMUST00000122307 319 ntBASIC8.64□□□□□ -1.03
Cux1P53564 n-R5s24-201ENSMUST00000122518 117 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Gm25291-201ENSMUST00000122795 144 ntBASIC8.64□□□□□ -1.03
Cux1P53564 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC8.64□□□□□ -1.03
Cux1P53564 Scarna13-201ENSMUST00000158164 275 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Gm27193-201ENSMUST00000184217 586 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Gm27148-201ENSMUST00000185086 160 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC8.64□□□□□ -1.03
Cux1P53564 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC8.64□□□□□ -1.03
Cux1P53564 Gm8291-201ENSMUST00000209635 1261 ntBASIC8.64□□□□□ -1.03
Cux1P53564 AC153840.1-201ENSMUST00000219685 313 ntBASIC8.64□□□□□ -1.03
Cux1P53564 AC153548.2-201ENSMUST00000219770 885 ntBASIC8.64□□□□□ -1.03
Cux1P53564 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC8.64□□□□□ -1.03
Cux1P53564 AC116724.1-201ENSMUST00000227900 972 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cux1P53564 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
Cux1P53564 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 AL591843.1-201ENSMUST00000223686 3082 ntBASIC8.64□□□□□ -1.03
Cux1P53564 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cux1P53564 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Cux1P53564 Gm17175-201ENSMUST00000172117 1403 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cux1P53564 Gm37249-201ENSMUST00000195185 2869 ntBASIC8.63□□□□□ -1.03
Cux1P53564 Gm6818-201ENSMUST00000190556 2558 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms