Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Mir7211-201ENSMUST00000184071 63 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm5334-201ENSMUST00000187472 720 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm42753-201ENSMUST00000196718 1268 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm9023-201ENSMUST00000198408 1038 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm43093-201ENSMUST00000202439 1213 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm5318-201ENSMUST00000205249 406 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm45908-201ENSMUST00000212977 1177 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm19987-201ENSMUST00000216339 499 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 AC147101.1-201ENSMUST00000217964 312 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm3800-201ENSMUST00000221086 554 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 CT030194.2-201ENSMUST00000225752 379 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Shmt1P50431 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Shmt1P50431 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm24200-201ENSMUST00000082955 157 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm14895-201ENSMUST00000121858 1361 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm15361-201ENSMUST00000119320 444 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm4853-201ENSMUST00000119359 394 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm13338-201ENSMUST00000120235 361 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm15237-201ENSMUST00000122104 469 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm25962-201ENSMUST00000157173 168 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm23954-201ENSMUST00000157213 353 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm2959-201ENSMUST00000169844 621 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm7952-201ENSMUST00000180540 984 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Mir6992-201ENSMUST00000183342 109 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm21742-201ENSMUST00000189352 548 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm6631-201ENSMUST00000193699 559 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm37838-201ENSMUST00000194464 312 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm36939-201ENSMUST00000194889 439 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm44243-201ENSMUST00000204323 692 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.43□□□□□ -1.38
Shmt1P50431 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC6.43□□□□□ -1.38
Shmt1P50431 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC6.43□□□□□ -1.38
Shmt1P50431 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC6.43□□□□□ -1.38
Shmt1P50431 AV026068-220ENSMUST00000224153 1147 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Shmt1P50431 AV026068-224ENSMUST00000224827 928 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 AC122393.2-201ENSMUST00000226404 1093 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 AC163664.2-201ENSMUST00000228894 459 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Shmt1P50431 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
Shmt1P50431 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Shmt1P50431 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm7869-201ENSMUST00000121457 1322 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Shmt1P50431 Gm44562-201ENSMUST00000207194 1347 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.43□□□□□ -1.38
Shmt1P50431 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms