Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm43929-201ENSMUST00000203025 409 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm2975-201ENSMUST00000209710 820 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm19170-201ENSMUST00000212440 1084 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Rfx1P48377 AC159472.1-201ENSMUST00000218178 463 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 AC110380.1-201ENSMUST00000226987 389 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Rfx1P48377 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC7.74□□□□□ -1.17
Rfx1P48377 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm43229-201ENSMUST00000201812 1850 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 Gm10727-201ENSMUST00000197107 1602 ntBASIC7.74□□□□□ -1.17
Rfx1P48377 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.74□□□□□ -1.17
Rfx1P48377 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Rfx1P48377 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Rfx1P48377 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Rfx1P48377 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 Rasgrp3-202ENSMUST00000164192 4665 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Rfx1P48377 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm25311-201ENSMUST00000104136 132 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm26419-201ENSMUST00000104272 133 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm14515-201ENSMUST00000121327 216 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm25052-201ENSMUST00000122661 158 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm17154-201ENSMUST00000165748 431 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm20432-201ENSMUST00000173716 250 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.73□□□□□ -1.17
Rfx1P48377 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm27014-201ENSMUST00000182658 937 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm29641-201ENSMUST00000188955 259 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm7142-201ENSMUST00000194232 586 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm37809-201ENSMUST00000195050 931 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm8454-201ENSMUST00000196980 811 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm42573-201ENSMUST00000202327 478 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm43973-201ENSMUST00000203562 210 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm5314-201ENSMUST00000204852 466 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 AC153541.1-201ENSMUST00000213786 294 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 AC091260.1-201ENSMUST00000216112 229 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm6477-201ENSMUST00000217098 764 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC7.73□□□□□ -1.17
Rfx1P48377 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 AC154573.2-201ENSMUST00000224174 378 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Rfx1P48377 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Rfx1P48377 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.73□□□□□ -1.17
Rfx1P48377 Gm44723-201ENSMUST00000207369 4000 ntBASIC7.73□□□□□ -1.17
Rfx1P48377 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Rfx1P48377 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
Rfx1P48377 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm25757-201ENSMUST00000103986 123 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Rfx1P48377 Gm15176-201ENSMUST00000117734 135 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm11926-201ENSMUST00000118520 430 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm14986-201ENSMUST00000121262 1002 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm12706-201ENSMUST00000121588 698 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm13555-201ENSMUST00000121668 319 ntBASIC7.72□□□□□ -1.17
Rfx1P48377 Gm15157-201ENSMUST00000121852 702 ntBASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms