Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.36□□□□□ -1.55
Tnfsf4P43488 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Tnfsf4P43488 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 n-R5s172-201ENSMUST00000104508 114 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm12193-201ENSMUST00000117250 379 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm14580-201ENSMUST00000119122 718 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm24477-201ENSMUST00000157438 103 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm25387-201ENSMUST00000157813 132 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm23995-201ENSMUST00000158060 129 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm3715-201ENSMUST00000172308 617 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm43629-201ENSMUST00000201782 704 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 AC159821.1-201ENSMUST00000214934 248 ntTSL 3 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Tnfsf4P43488 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.35□□□□□ -1.55
Tnfsf4P43488 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm12131-201ENSMUST00000117479 359 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm14472-201ENSMUST00000119815 282 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm15781-201ENSMUST00000120216 323 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm15618-201ENSMUST00000121610 452 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm12618-201ENSMUST00000121754 483 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm23806-201ENSMUST00000175157 109 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm24303-201ENSMUST00000178237 126 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm29474-201ENSMUST00000187688 379 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm5734-201ENSMUST00000189787 913 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm37024-201ENSMUST00000192224 868 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm37444-201ENSMUST00000193605 439 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Ighv5-5-201ENSMUST00000193826 329 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm18553-201ENSMUST00000194152 634 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 AC099760.1-201ENSMUST00000196300 153 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm43772-201ENSMUST00000202052 379 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm44768-201ENSMUST00000205719 393 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm44892-201ENSMUST00000208595 488 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm45850-201ENSMUST00000212536 338 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm8672-201ENSMUST00000221200 332 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm5830-201ENSMUST00000049117 443 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Gm5612-201ENSMUST00000053326 375 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.34□□□□□ -1.55
Tnfsf4P43488 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Tnfsf4P43488 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms