Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Cdx2P43241 Mir5103-201ENSMUST00000175111 79 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
Cdx2P43241 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx2P43241 Olfr1215-201ENSMUST00000188399 943 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdx2P43241 Gm37932-201ENSMUST00000192258 1167 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Gm43078-201ENSMUST00000197222 168 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Gm44225-201ENSMUST00000203582 186 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
Cdx2P43241 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.5□□□□□ -1.53
Cdx2P43241 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx2P43241 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx2P43241 AC091783.2-201ENSMUST00000224626 740 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 AC152394.2-202ENSMUST00000228503 1064 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdx2P43241 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdx2P43241 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.5□□□□□ -1.53
Cdx2P43241 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx2P43241 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx2P43241 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Cdx2P43241 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx2P43241 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm6134-201ENSMUST00000117265 171 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Gm14382-201ENSMUST00000117374 437 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Gm11990-201ENSMUST00000121505 897 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 n-R5s201-201ENSMUST00000122622 116 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Gm23954-201ENSMUST00000157213 353 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Gm27039-201ENSMUST00000182438 962 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Mir6343-201ENSMUST00000183584 84 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Mir7087-201ENSMUST00000184840 70 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm17981-201ENSMUST00000191109 739 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Gm37436-201ENSMUST00000193842 1085 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.49□□□□□ -1.53
Cdx2P43241 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdx2P43241 Clec4b1-201ENSMUST00000077228 674 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx2P43241 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.49□□□□□ -1.53
Cdx2P43241 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx2P43241 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Cdx2P43241 Gm45172-201ENSMUST00000206054 1301 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx2P43241 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx2P43241 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cdx2P43241 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx2P43241 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Cdx2P43241 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx2P43241 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Cdx2P43241 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx2P43241 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm25422-201ENSMUST00000104219 129 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm13333-201ENSMUST00000119424 781 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm12732-201ENSMUST00000121688 180 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx2P43241 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx2P43241 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Cdx2P43241 Gm24860-201ENSMUST00000158457 276 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm20545-201ENSMUST00000174739 210 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.48□□□□□ -1.53
Cdx2P43241 Gm17984-201ENSMUST00000205286 859 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Cdx2P43241 Gm4548-201ENSMUST00000208487 509 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm6009-201ENSMUST00000210848 280 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.48□□□□□ -1.53
Cdx2P43241 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.48□□□□□ -1.53
Cdx2P43241 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx2P43241 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC5.48□□□□□ -1.53
Cdx2P43241 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 161.6 ms