Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
Traf1P39428 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Traf1P39428 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Traf1P39428 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Traf1P39428 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Traf1P39428 Gm37775-201ENSMUST00000194120 2313 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Traf1P39428 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Traf1P39428 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Traf1P39428 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Traf1P39428 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Traf1P39428 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.79□□□□□ -1.32
Traf1P39428 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
Traf1P39428 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Gm12482-201ENSMUST00000120435 630 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Gm11990-201ENSMUST00000121505 897 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Traf1P39428 Gm23662-201ENSMUST00000158046 111 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Traf1P39428 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Traf1P39428 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
Traf1P39428 Gm18342-201ENSMUST00000186987 694 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Traf1P39428 Gm2427-201ENSMUST00000189121 881 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Gm6009-201ENSMUST00000210848 280 ntBASIC6.79□□□□□ -1.32
Traf1P39428 LOC665443-201ENSMUST00000212284 796 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Gm18996-201ENSMUST00000214851 755 ntBASIC6.79□□□□□ -1.32
Traf1P39428 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Traf1P39428 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Traf1P39428 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Traf1P39428 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Traf1P39428 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.79□□□□□ -1.32
Traf1P39428 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC6.79□□□□□ -1.32
Traf1P39428 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.79□□□□□ -1.32
Traf1P39428 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.79□□□□□ -1.32
Traf1P39428 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Traf1P39428 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.79□□□□□ -1.32
Traf1P39428 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Traf1P39428 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.78□□□□□ -1.32
Traf1P39428 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Traf1P39428 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Traf1P39428 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.78□□□□□ -1.32
Traf1P39428 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gm5381-201ENSMUST00000117975 1250 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm13771-201ENSMUST00000117988 238 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm7189-201ENSMUST00000119811 429 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm14515-201ENSMUST00000121327 216 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gm25826-201ENSMUST00000157090 137 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm25152-201ENSMUST00000157117 114 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm26372-201ENSMUST00000157831 236 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm23280-201ENSMUST00000157905 139 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm6808-201ENSMUST00000162341 807 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.78□□□□□ -1.32
Traf1P39428 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC6.78□□□□□ -1.32
Traf1P39428 Gm3242-201ENSMUST00000171273 485 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Traf1P39428 Gm22852-201ENSMUST00000177899 101 ntBASIC6.78□□□□□ -1.32
Traf1P39428 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Gm28066-201ENSMUST00000188657 472 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.78□□□□□ -1.32
Traf1P39428 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.78□□□□□ -1.32
Traf1P39428 Gm44053-201ENSMUST00000203364 929 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm45156-201ENSMUST00000207255 439 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm45596-201ENSMUST00000209279 434 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Traf1P39428 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.78□□□□□ -1.32
Traf1P39428 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC6.78□□□□□ -1.32
Traf1P39428 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.78□□□□□ -1.32
Traf1P39428 AC131117.1-201ENSMUST00000225154 1171 ntBASIC6.78□□□□□ -1.32
Traf1P39428 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Tas2r108-201ENSMUST00000038750 1013 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Traf1P39428 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Traf1P39428 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Traf1P39428 Gm24200-201ENSMUST00000082955 157 ntBASIC6.78□□□□□ -1.32
Traf1P39428 n-R5s161-201ENSMUST00000083728 114 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Gm24029-201ENSMUST00000083928 143 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Traf1P39428 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Traf1P39428 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Traf1P39428 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.78□□□□□ -1.32
Traf1P39428 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms