Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm7554-201ENSMUST00000202282 574 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm44075-201ENSMUST00000204208 216 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm44243-201ENSMUST00000204323 692 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm44091-201ENSMUST00000205212 649 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm45845-201ENSMUST00000207326 582 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm7769-201ENSMUST00000212900 933 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.83□□□□□ -1.48
Lire1P11260 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm4057-201ENSMUST00000221407 368 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm35619-201ENSMUST00000222548 600 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Lire1P11260 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Lire1P11260 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC5.83□□□□□ -1.48
Lire1P11260 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Gm45066-201ENSMUST00000207528 2551 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 AC124516.2-201ENSMUST00000221455 1829 ntBASIC5.83□□□□□ -1.48
Lire1P11260 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lire1P11260 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Lire1P11260 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC5.82□□□□□ -1.48
Lire1P11260 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Lire1P11260 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
Lire1P11260 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lire1P11260 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Lire1P11260 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Lire1P11260 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lire1P11260 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Lire1P11260 Gm11105-201ENSMUST00000112781 478 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm12261-201ENSMUST00000117499 645 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm11877-201ENSMUST00000118921 852 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm13338-201ENSMUST00000120235 361 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.82□□□□□ -1.48
Lire1P11260 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm23964-201ENSMUST00000157966 107 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm23896-201ENSMUST00000158109 130 ntBASIC5.82□□□□□ -1.48
Lire1P11260 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.82□□□□□ -1.48
Lire1P11260 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lire1P11260 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lire1P11260 Gm21772-201ENSMUST00000169213 478 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm17126-201ENSMUST00000172276 523 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm20620-201ENSMUST00000177528 168 ntBASIC5.82□□□□□ -1.48
Lire1P11260 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm28527-201ENSMUST00000185210 297 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm29281-201ENSMUST00000188077 381 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 Gm8939-201ENSMUST00000192577 964 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC5.82□□□□□ -1.48
Lire1P11260 Gm44361-201ENSMUST00000197960 94 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm42452-201ENSMUST00000199749 617 ntBASIC5.82□□□□□ -1.48
Lire1P11260 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC5.82□□□□□ -1.48
Lire1P11260 Gm18009-201ENSMUST00000203239 1016 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm44221-201ENSMUST00000203552 388 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm43867-201ENSMUST00000203860 525 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Gm17918-201ENSMUST00000205315 574 ntBASIC5.82□□□□□ -1.48
Lire1P11260 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.82□□□□□ -1.48
Lire1P11260 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.82□□□□□ -1.48
Lire1P11260 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.82□□□□□ -1.48
Lire1P11260 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.82□□□□□ -1.48
Lire1P11260 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.82□□□□□ -1.48
Lire1P11260 AC159263.3-201ENSMUST00000223434 460 ntBASIC5.82□□□□□ -1.48
Lire1P11260 AC154634.3-201ENSMUST00000224589 736 ntBASIC5.82□□□□□ -1.48
Lire1P11260 AC158750.1-201ENSMUST00000226163 634 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lire1P11260 Gm7117-201ENSMUST00000071515 387 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Lire1P11260 Defa-ps18-201ENSMUST00000098889 371 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Lire1P11260 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lire1P11260 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.82□□□□□ -1.48
Lire1P11260 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lire1P11260 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
Lire1P11260 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Lire1P11260 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lire1P11260 AC131720.1-201ENSMUST00000218629 2132 ntBASIC5.81□□□□□ -1.48
Lire1P11260 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms