Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm15959-201ENSMUST00000121724 368 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm15840-201ENSMUST00000122099 943 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm25459-201ENSMUST00000157953 114 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm8783-201ENSMUST00000159764 522 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm2058-201ENSMUST00000178791 560 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm43779-201ENSMUST00000196691 829 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm45082-201ENSMUST00000206082 601 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm44571-201ENSMUST00000208092 533 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm45596-201ENSMUST00000209279 434 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm45246-201ENSMUST00000210820 367 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 AC156569.1-201ENSMUST00000222020 3841 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 AC154556.1-201ENSMUST00000224587 885 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm5582-201ENSMUST00000075251 522 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm29438-201ENSMUST00000191298 2613 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Gm37482-201ENSMUST00000194899 2791 ntBASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Chmp6P0C0A3 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 AC115289.2-201ENSMUST00000223836 2803 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm11893-201ENSMUST00000117829 491 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm14925-201ENSMUST00000120611 438 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm24719-201ENSMUST00000157520 110 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm7152-201ENSMUST00000163570 605 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm22650-201ENSMUST00000175138 105 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm23617-201ENSMUST00000175410 95 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm37203-201ENSMUST00000191618 385 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm17988-201ENSMUST00000208796 535 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm45750-201ENSMUST00000211966 354 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 AC079644.3-201ENSMUST00000222452 357 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm18247-201ENSMUST00000222937 601 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 AC129597.1-201ENSMUST00000223046 1234 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Chmp6P0C0A3 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Gm43682-201ENSMUST00000202150 2090 ntBASIC6.15□□□□□ -1.42
Chmp6P0C0A3 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms