Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm26486-201ENSMUST00000158021 110 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm27409-201ENSMUST00000184727 80 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm5066-201ENSMUST00000188479 822 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm20770-201ENSMUST00000193474 694 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm37308-201ENSMUST00000194684 100 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm42652-201ENSMUST00000199073 614 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm5110-201ENSMUST00000203122 1063 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm8613-201ENSMUST00000220383 1077 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm6056-201ENSMUST00000221253 488 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Srp54bE9PXC0 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm43771-201ENSMUST00000202931 1578 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm43062-201ENSMUST00000196302 1319 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm11737-201ENSMUST00000118713 468 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm12488-201ENSMUST00000122449 499 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm22959-201ENSMUST00000122514 303 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm25962-201ENSMUST00000157173 168 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm23250-201ENSMUST00000157444 267 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm9006-201ENSMUST00000165520 841 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm18342-201ENSMUST00000186987 694 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm28066-201ENSMUST00000188657 472 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm2427-201ENSMUST00000189121 881 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm19124-201ENSMUST00000191041 832 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Mir219c-201ENSMUST00000199860 60 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm44243-201ENSMUST00000204323 692 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 CT025523.1-201ENSMUST00000228318 694 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm23624-201ENSMUST00000082463 321 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm23456-201ENSMUST00000083335 137 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Srp54bE9PXC0 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Srp54bE9PXC0 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.79□□□□□ -1.48
Srp54bE9PXC0 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Srp54bE9PXC0 AC110043.1-201ENSMUST00000220278 1627 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 289.6 ms