Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm18553-201ENSMUST00000194152 634 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 AC153153.2-201ENSMUST00000223572 411 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 AC154436.2-201ENSMUST00000227408 208 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm7665-201ENSMUST00000076710 297 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm24405-201ENSMUST00000083033 167 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 AC114585.1-201ENSMUST00000228080 3680 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 AC135669.2-201ENSMUST00000215636 4958 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm5084-202ENSMUST00000224064 3609 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm43874-201ENSMUST00000204853 2798 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 AC174797.5-201ENSMUST00000225055 1860 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm22710-201ENSMUST00000116892 125 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm12641-201ENSMUST00000117874 985 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm7927-201ENSMUST00000118818 880 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm15741-201ENSMUST00000119401 754 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm25534-201ENSMUST00000175365 125 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm26595-201ENSMUST00000181585 484 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm29124-201ENSMUST00000186576 452 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm20954-201ENSMUST00000189078 644 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm20203-201ENSMUST00000192352 332 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Gm7496-201ENSMUST00000192573 1034 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 AC132384.8-201ENSMUST00000218152 1204 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 AC154323.1-201ENSMUST00000228329 1231 ntBASIC4.78□□□□□ -1.64
Col6a4A2AX52 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Col6a4A2AX52 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 AC126549.1-201ENSMUST00000225044 3687 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm24429-201ENSMUST00000104076 132 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm12181-201ENSMUST00000121448 531 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm23700-201ENSMUST00000158842 102 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm26950-201ENSMUST00000182734 498 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm5844-201ENSMUST00000119417 2191 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm6011-201ENSMUST00000211736 1796 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm42541-201ENSMUST00000199871 2249 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm45177-201ENSMUST00000209104 2307 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm37875-201ENSMUST00000192101 1498 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm26310-201ENSMUST00000157766 117 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 Gm18100-201ENSMUST00000200897 452 ntBASIC4.77□□□□□ -1.65
Col6a4A2AX52 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC4.77□□□□□ -1.65
Col6a4A2AX52 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms