Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gabra3-201ENSMUST00000055966 3662 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Gm13991-201ENSMUST00000120190 648 ntBASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Gm11507-201ENSMUST00000156462 412 ntBASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Gm44683-201ENSMUST00000209088 484 ntBASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Gm20368-201ENSMUST00000220716 301 ntBASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Tpbpb-203ENSMUST00000223978 991 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 AC161609.1-201ENSMUST00000225878 474 ntBASIC6.29□□□□□ -1.4
Scn3aA2ASI5 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.29□□□□□ -1.4
Scn3aA2ASI5 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm11227-201ENSMUST00000119774 471 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm15490-201ENSMUST00000119894 387 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm5139-201ENSMUST00000175943 249 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm4832-201ENSMUST00000182679 399 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm18717-201ENSMUST00000192744 1241 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm45082-201ENSMUST00000206082 601 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm18468-201ENSMUST00000207321 369 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm18470-201ENSMUST00000207467 420 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm18465-201ENSMUST00000207468 369 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm18464-201ENSMUST00000207803 420 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm18458-201ENSMUST00000207908 369 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm18461-201ENSMUST00000208421 420 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm2961-201ENSMUST00000211074 772 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Scn3aA2ASI5 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Rapgef5-201ENSMUST00000109691 6746 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm22273-201ENSMUST00000104040 132 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm15187-201ENSMUST00000122329 264 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Mir6539-201ENSMUST00000183732 110 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm29284-201ENSMUST00000188363 255 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Trbv9-201ENSMUST00000194494 290 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm44580-201ENSMUST00000206333 877 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 AC154323.1-201ENSMUST00000228329 1231 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm43360-201ENSMUST00000197656 2887 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm14212-201ENSMUST00000122023 826 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm6081-201ENSMUST00000134472 489 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm18215-201ENSMUST00000204429 798 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm45156-201ENSMUST00000207255 439 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm45405-201ENSMUST00000211544 609 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Scn3aA2ASI5 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Gm18853-201ENSMUST00000183629 3596 ntBASIC6.26□□□□□ -1.41
Scn3aA2ASI5 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms