Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm8250-201ENSMUST00000117398 774 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm14173-201ENSMUST00000117690 278 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm11447-201ENSMUST00000118983 858 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm12451-201ENSMUST00000121636 633 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm16180-201ENSMUST00000128662 312 ntTSL 3 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm23855-201ENSMUST00000158377 135 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm23343-201ENSMUST00000158964 143 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm6223-201ENSMUST00000178436 871 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm17048-201ENSMUST00000179266 847 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm7626-201ENSMUST00000195801 353 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm44623-201ENSMUST00000207934 434 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm18329-201ENSMUST00000215832 589 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.22□□□□□ -1.57
CtcflA2APF3 AC154851.1-201ENSMUST00000221591 655 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm24695-201ENSMUST00000083877 83 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CtcflA2APF3 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm44739-201ENSMUST00000205294 1426 ntBASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CtcflA2APF3 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CtcflA2APF3 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
CtcflA2APF3 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CtcflA2APF3 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Cxcl11-202ENSMUST00000122808 3794 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CtcflA2APF3 Pramel3-201ENSMUST00000113176 3673 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CtcflA2APF3 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm12439-201ENSMUST00000117162 365 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm16420-201ENSMUST00000120258 856 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm22223-201ENSMUST00000157360 125 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm23894-201ENSMUST00000158107 313 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm21877-201ENSMUST00000185640 694 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm43779-201ENSMUST00000196691 829 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm45082-201ENSMUST00000206082 601 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.21□□□□□ -1.58
CtcflA2APF3 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.21□□□□□ -1.58
CtcflA2APF3 AC137902.1-201ENSMUST00000228184 102 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm5229-201ENSMUST00000039375 354 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm18189-201ENSMUST00000218153 1951 ntBASIC5.21□□□□□ -1.58
CtcflA2APF3 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CtcflA2APF3 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CtcflA2APF3 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.21□□□□□ -1.58
CtcflA2APF3 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CtcflA2APF3 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CtcflA2APF3 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.2□□□□□ -1.58
CtcflA2APF3 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.2□□□□□ -1.58
CtcflA2APF3 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CtcflA2APF3 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms