Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm45870-201ENSMUST00000211269 601 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 AC153505.2-201ENSMUST00000217741 277 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm18591-201ENSMUST00000220568 763 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm6990-201ENSMUST00000086830 348 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm5512-201ENSMUST00000218013 1353 ntBASIC5.55□□□□□ -1.52
Lima1Q9ERG0 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29381-201ENSMUST00000190168 1497 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm23440-201ENSMUST00000104299 130 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm26144-201ENSMUST00000104475 132 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm12110-201ENSMUST00000121601 579 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm16102-201ENSMUST00000160955 420 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm7952-201ENSMUST00000180540 984 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm8183-201ENSMUST00000183134 980 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Lima1Q9ERG0 Gm28934-201ENSMUST00000186491 346 ntBASIC5.54□□□□□ -1.52
Lima1Q9ERG0 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms