Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm5073-201ENSMUST00000118222 820 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm3715-201ENSMUST00000172308 617 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Mir3095-201ENSMUST00000175552 87 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm37256-201ENSMUST00000193034 566 ntTSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm43946-201ENSMUST00000204058 886 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm4032-201ENSMUST00000210886 487 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm36936-201ENSMUST00000194508 2749 ntBASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Cdc40Q9DC48 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm13531-201ENSMUST00000121893 543 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm15335-201ENSMUST00000122442 411 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm3008-201ENSMUST00000160566 571 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm8582-201ENSMUST00000164061 789 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm24103-201ENSMUST00000174930 77 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm18953-201ENSMUST00000175694 300 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Vis1-201ENSMUST00000183957 201 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm29124-201ENSMUST00000186576 452 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm28640-201ENSMUST00000190918 550 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm43222-201ENSMUST00000199013 603 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm4012-201ENSMUST00000221504 581 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 CT030195.1-201ENSMUST00000223887 378 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 CU062626.1-201ENSMUST00000225248 505 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm24200-201ENSMUST00000082955 157 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm43328-201ENSMUST00000198544 1434 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Cdc40Q9DC48 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm15233-201ENSMUST00000118747 400 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm14783-201ENSMUST00000118900 663 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm13690-201ENSMUST00000118989 285 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Gm14335-201ENSMUST00000119165 810 ntBASIC5.36□□□□□ -1.55
Cdc40Q9DC48 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms