Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm8860-201ENSMUST00000193160 445 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-29-201ENSMUST00000194116 342 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm42976-201ENSMUST00000200313 222 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm44023-201ENSMUST00000203710 469 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm45525-201ENSMUST00000210800 389 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 AC159979.1-201ENSMUST00000227927 342 ntBASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ddx56Q9D0R4 Gm42540-201ENSMUST00000200319 2008 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 AC130831.1-201ENSMUST00000224546 1474 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm37342-201ENSMUST00000194588 4965 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm8569-201ENSMUST00000117630 647 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm14115-201ENSMUST00000119242 482 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm14098-201ENSMUST00000119295 623 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm9085-201ENSMUST00000119994 1072 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm12880-201ENSMUST00000120652 494 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm15164-201ENSMUST00000122203 271 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm11575-201ENSMUST00000122243 228 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm23205-201ENSMUST00000158671 103 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm37098-201ENSMUST00000192290 244 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm5554-201ENSMUST00000199726 1206 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm7443-201ENSMUST00000206355 378 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm30646-201ENSMUST00000207662 180 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm45878-201ENSMUST00000211839 241 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 AC152394.2-202ENSMUST00000228503 1064 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Olfr1441-201ENSMUST00000059033 1088 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 n-R5s180-201ENSMUST00000082770 106 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 1700129L04Rik-202ENSMUST00000189291 1401 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Ddx56Q9D0R4 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.54□□□□□ -1.36
Ddx56Q9D0R4 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms