Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm5073-201ENSMUST00000118222 820 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm14098-201ENSMUST00000119295 623 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm14716-201ENSMUST00000120138 718 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm24363-201ENSMUST00000158440 311 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm2959-201ENSMUST00000169844 621 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm27160-201ENSMUST00000184837 199 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm20770-201ENSMUST00000193474 694 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm43744-201ENSMUST00000196387 688 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm45413-201ENSMUST00000210389 3538 ntBASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Smc1aQ9CU62 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm11984-201ENSMUST00000118142 766 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm13991-201ENSMUST00000120190 648 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm14331-201ENSMUST00000120396 409 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm3008-201ENSMUST00000160566 571 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm6541-201ENSMUST00000165542 561 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm24957-201ENSMUST00000179604 132 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Mir6992-201ENSMUST00000183342 109 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm44382-201ENSMUST00000198683 122 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 4930519H02Rik-202ENSMUST00000198907 968 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm31211-201ENSMUST00000199170 253 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm43561-201ENSMUST00000199866 448 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm7890-201ENSMUST00000204877 601 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Smc1aQ9CU62 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm16423-201ENSMUST00000120078 947 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm24731-201ENSMUST00000158227 131 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm5990-201ENSMUST00000203126 746 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm44837-201ENSMUST00000206863 717 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm17988-201ENSMUST00000208796 535 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 LOC665443-201ENSMUST00000212284 796 ntBASIC6.48□□□□□ -1.37
Smc1aQ9CU62 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.48□□□□□ -1.37
Smc1aQ9CU62 Gm34165-201ENSMUST00000222012 1174 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms