Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm45156-201ENSMUST00000207255 439 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm7499-201ENSMUST00000210423 813 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm45608-201ENSMUST00000210948 389 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm8863-201ENSMUST00000216630 926 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 CT030645.3-201ENSMUST00000225483 1022 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 AC154718.1-201ENSMUST00000226676 250 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm25799-201ENSMUST00000082643 107 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm10540-201ENSMUST00000097581 276 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.82□□□□□ -1.48
Msh4Q99MT2 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msh4Q99MT2 Gm43781-201ENSMUST00000197634 2681 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm5832-201ENSMUST00000121704 1582 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm23739-201ENSMUST00000102295 108 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm15103-201ENSMUST00000119893 871 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm4660-201ENSMUST00000131499 403 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm24854-201ENSMUST00000158025 98 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm17121-201ENSMUST00000170414 847 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm22655-201ENSMUST00000174949 96 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm25065-201ENSMUST00000177914 132 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm25891-201ENSMUST00000180050 132 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm17222-201ENSMUST00000180135 847 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm28934-201ENSMUST00000186491 346 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm28080-201ENSMUST00000188552 722 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm21524-201ENSMUST00000190499 696 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm21715-201ENSMUST00000191056 694 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm37838-201ENSMUST00000194464 312 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm36378-201ENSMUST00000201709 388 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm7832-201ENSMUST00000202613 880 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm19033-201ENSMUST00000208516 964 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm10095-201ENSMUST00000222765 483 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Ube2nl-201ENSMUST00000085228 456 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm37569-201ENSMUST00000192111 1722 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Serpina10-201ENSMUST00000044231 3498 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gm43469-201ENSMUST00000196084 4634 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.81□□□□□ -1.48
Msh4Q99MT2 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msh4Q99MT2 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msh4Q99MT2 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.8□□□□□ -1.48
Msh4Q99MT2 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms