Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Hmgn3-205ENSMUST00000187193 855 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm38201-201ENSMUST00000192143 387 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm44395-201ENSMUST00000197056 153 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm43222-201ENSMUST00000199013 603 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm44312-201ENSMUST00000203536 469 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm18467-201ENSMUST00000208805 434 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm19116-201ENSMUST00000218592 642 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 AC073562.1-201ENSMUST00000222117 401 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Olfr480-201ENSMUST00000071658 1029 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm24200-201ENSMUST00000082955 157 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm18716-201ENSMUST00000204507 1603 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Pcdha9Q91Y11 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm43169-201ENSMUST00000199544 4734 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm5949-201ENSMUST00000213468 1421 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm24709-201ENSMUST00000104123 132 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm25345-201ENSMUST00000104505 133 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm15781-201ENSMUST00000120216 323 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm15187-201ENSMUST00000122329 264 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm23819-201ENSMUST00000158744 109 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm10177-201ENSMUST00000160052 444 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm16563-201ENSMUST00000162673 423 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Mir7046-201ENSMUST00000183435 66 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm29640-201ENSMUST00000187972 278 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm37196-201ENSMUST00000194762 906 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm43392-201ENSMUST00000196560 434 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm43992-201ENSMUST00000204358 197 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 AC153529.1-201ENSMUST00000217818 370 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm24029-201ENSMUST00000083928 143 ntBASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Pcdha9Q91Y11 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Gm43874-201ENSMUST00000204853 2798 ntBASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Gm38081-201ENSMUST00000192680 1645 ntBASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Gm44750-201ENSMUST00000206185 2223 ntBASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Mir700-201ENSMUST00000102169 79 ntBASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Pcdha9Q91Y11 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 249.1 ms