Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm8009-201ENSMUST00000191672 436 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm44312-201ENSMUST00000203536 469 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm45473-201ENSMUST00000211452 616 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm45701-201ENSMUST00000212049 235 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 AC122901.2-201ENSMUST00000216926 285 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 AC105407.1-201ENSMUST00000225684 614 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm42507-201ENSMUST00000201187 2555 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CopaQ8CIE6 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.2□□□□□ -1.42
CopaQ8CIE6 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm37132-201ENSMUST00000195553 2238 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 AC153729.4-201ENSMUST00000217582 3826 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm15933-201ENSMUST00000117215 616 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm6884-201ENSMUST00000119318 615 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm11910-201ENSMUST00000121624 432 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm15274-201ENSMUST00000131442 291 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm21979-201ENSMUST00000139887 291 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm15259-201ENSMUST00000151262 291 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm24733-201ENSMUST00000158863 253 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm24179-201ENSMUST00000158925 127 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm3242-201ENSMUST00000171273 485 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm4207-201ENSMUST00000173144 960 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Mir6361-201ENSMUST00000185079 101 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm29492-201ENSMUST00000187124 457 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm6693-201ENSMUST00000189583 813 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm38097-201ENSMUST00000192936 439 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm38268-201ENSMUST00000195813 193 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm42593-201ENSMUST00000198469 377 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm43295-201ENSMUST00000201439 412 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm18290-201ENSMUST00000202900 844 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm7570-201ENSMUST00000215246 698 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 AC119894.1-201ENSMUST00000220399 350 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm4822-201ENSMUST00000077551 479 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm8526-201ENSMUST00000079153 475 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gm43831-201ENSMUST00000200461 2598 ntBASIC6.19□□□□□ -1.42
CopaQ8CIE6 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CopaQ8CIE6 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC6.19□□□□□ -1.42
CopaQ8CIE6 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms