Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm26353-201ENSMUST00000158224 255 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm10087-201ENSMUST00000167650 330 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm23806-201ENSMUST00000175157 109 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm7745-201ENSMUST00000182235 973 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm27781-201ENSMUST00000185185 92 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm29519-201ENSMUST00000186994 398 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm29474-201ENSMUST00000187688 379 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm9317-201ENSMUST00000197055 862 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Ighv1-73-201ENSMUST00000197435 352 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm43629-201ENSMUST00000201782 704 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm44252-201ENSMUST00000204187 330 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm7802-201ENSMUST00000216464 262 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 AC123067.1-201ENSMUST00000217711 462 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm18066-201ENSMUST00000210904 1774 ntBASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Ankrd49-202ENSMUST00000214456 3207 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.84□□□□□ -1.47
Ccdc28aQ8CEI3 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc28aQ8CEI3 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc28aQ8CEI3 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Ccdc28aQ8CEI3 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.84□□□□□ -1.48
Ccdc28aQ8CEI3 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm22428-201ENSMUST00000158554 132 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm3650-201ENSMUST00000180600 747 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm29201-201ENSMUST00000189120 431 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm8826-201ENSMUST00000193161 948 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm3351-201ENSMUST00000193454 505 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Mir6516-201ENSMUST00000196236 110 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm44432-201ENSMUST00000203342 938 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 AC131187.2-201ENSMUST00000223936 994 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Ccdc28aQ8CEI3 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm11774-201ENSMUST00000118601 293 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm14472-201ENSMUST00000119815 282 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm13669-201ENSMUST00000122366 457 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm16297-201ENSMUST00000161466 459 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Gm24812-201ENSMUST00000175315 284 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.82□□□□□ -1.48
Ccdc28aQ8CEI3 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms