Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 AC107232.1-201ENSMUST00000227785 1503 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup88Q8CEC0 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm15073-201ENSMUST00000117432 634 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm13033-201ENSMUST00000117591 1057 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm12482-201ENSMUST00000120435 630 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm9671-201ENSMUST00000171502 547 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm21399-201ENSMUST00000180210 597 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm37581-201ENSMUST00000192371 988 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm42652-201ENSMUST00000199073 614 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm43929-201ENSMUST00000203025 409 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm17988-201ENSMUST00000208796 535 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Il9-201ENSMUST00000022019 536 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm6056-201ENSMUST00000221253 488 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 AC170810.1-201ENSMUST00000228267 672 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm23624-201ENSMUST00000082463 321 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Gm7205-201ENSMUST00000196032 1323 ntBASIC6.75□□□□□ -1.33
Nup88Q8CEC0 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm14659-201ENSMUST00000117667 843 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm14335-201ENSMUST00000119165 810 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm14267-201ENSMUST00000119751 496 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm13121-201ENSMUST00000120637 632 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm12494-201ENSMUST00000121684 521 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm37341-201ENSMUST00000194680 371 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm43054-201ENSMUST00000199495 884 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm45082-201ENSMUST00000206082 601 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm45343-201ENSMUST00000210452 828 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 AC134254.2-201ENSMUST00000221262 170 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 n-R5s69-201ENSMUST00000083872 119 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm37553-201ENSMUST00000194135 1602 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Nup88Q8CEC0 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms