Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sh3rf2Q8BZT2 AC164567.3-201ENSMUST00000217743 2869 ntBASIC6.04□□□□□ -1.44
Sh3rf2Q8BZT2 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.04□□□□□ -1.44
Sh3rf2Q8BZT2 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm26067-201ENSMUST00000103789 110 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm13469-201ENSMUST00000118231 350 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Anp32-ps-201ENSMUST00000118265 388 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm6620-201ENSMUST00000120113 715 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm12482-201ENSMUST00000120435 630 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm12293-201ENSMUST00000121898 590 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm8902-201ENSMUST00000174341 1096 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm3605-201ENSMUST00000185858 440 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm37341-201ENSMUST00000194680 371 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm43044-201ENSMUST00000198091 379 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm43436-201ENSMUST00000199308 147 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm44432-201ENSMUST00000203342 938 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm44243-201ENSMUST00000204323 692 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm18996-201ENSMUST00000214851 755 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm18409-202ENSMUST00000220105 529 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 AC133517.2-201ENSMUST00000226820 690 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sh3rf2Q8BZT2 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
Sh3rf2Q8BZT2 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm14335-201ENSMUST00000119165 810 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm6744-201ENSMUST00000119303 543 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm16423-201ENSMUST00000120078 947 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm14713-201ENSMUST00000122362 686 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm23954-201ENSMUST00000157213 353 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm6808-201ENSMUST00000162341 807 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.02□□□□□ -1.45
Sh3rf2Q8BZT2 Gm28066-201ENSMUST00000188657 472 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms