Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm9202-201ENSMUST00000223036 437 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Rybp-ps-201ENSMUST00000069489 681 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm43611-201ENSMUST00000196656 4352 ntBASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Usp40Q8BWR4 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Cmah-208ENSMUST00000224819 9482 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm14836-201ENSMUST00000118567 471 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm15660-201ENSMUST00000118997 478 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm16129-201ENSMUST00000152628 486 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Mir1970-201ENSMUST00000157839 104 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm27887-201ENSMUST00000184367 102 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm29124-201ENSMUST00000186576 452 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm43629-201ENSMUST00000201782 704 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm44243-201ENSMUST00000204323 692 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm18598-201ENSMUST00000207724 597 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm20586-201ENSMUST00000210122 547 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 AC122332.1-201ENSMUST00000214384 285 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 AL603745.1-201ENSMUST00000215473 532 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 AC110381.1-201ENSMUST00000218987 586 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 AC167192.4-201ENSMUST00000224087 993 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm23330-201ENSMUST00000082660 164 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Mir194-1-201ENSMUST00000083647 67 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm11242-201ENSMUST00000120103 2457 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 AC154630.1-201ENSMUST00000215334 2440 ntBASIC8.15□□□□□ -1.1
Usp40Q8BWR4 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.15□□□□□ -1.1
Usp40Q8BWR4 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Usp40Q8BWR4 Gm42930-201ENSMUST00000200872 3260 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 AC183268.1-201ENSMUST00000215753 2837 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 AC154552.6-201ENSMUST00000221365 1342 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm29438-201ENSMUST00000191298 2613 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm13533-201ENSMUST00000121104 177 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm11990-201ENSMUST00000121505 897 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm6542-201ENSMUST00000153606 772 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm26167-201ENSMUST00000158423 253 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm8604-201ENSMUST00000183150 965 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm23011-202ENSMUST00000197855 275 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Gm10709-201ENSMUST00000213318 480 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC8.14□□□□□ -1.11
Usp40Q8BWR4 AC116465.1-201ENSMUST00000220324 235 ntBASIC8.14□□□□□ -1.11
Usp40Q8BWR4 AC123658.1-201ENSMUST00000228364 867 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 118.5 ms