Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm23224-201ENSMUST00000158122 271 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm25363-201ENSMUST00000158850 245 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm23631-201ENSMUST00000175291 123 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm26595-201ENSMUST00000181585 484 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm43456-201ENSMUST00000202519 457 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm45070-201ENSMUST00000208100 246 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm45525-201ENSMUST00000210800 389 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm11360-201ENSMUST00000221898 262 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm7887-201ENSMUST00000056948 537 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.87□□□□□ -1.47
Nup54Q8BTS4 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm4973-201ENSMUST00000206925 1334 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm26078-201ENSMUST00000104067 128 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm12677-201ENSMUST00000118668 426 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm11617-201ENSMUST00000119609 639 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm37308-201ENSMUST00000194684 100 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm43382-201ENSMUST00000198954 838 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Mir219c-201ENSMUST00000199860 60 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm34149-201ENSMUST00000203547 304 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nup54Q8BTS4 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.85□□□□□ -1.47
Nup54Q8BTS4 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
Nup54Q8BTS4 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.85□□□□□ -1.47
Nup54Q8BTS4 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
Nup54Q8BTS4 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Nup54Q8BTS4 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nup54Q8BTS4 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Nup54Q8BTS4 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Nup54Q8BTS4 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.85□□□□□ -1.47
Nup54Q8BTS4 Ear-ps2-201ENSMUST00000100689 466 ntBASIC5.85□□□□□ -1.47
Nup54Q8BTS4 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms