Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm23149-201ENSMUST00000158837 230 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm17091-201ENSMUST00000163248 357 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm21756-201ENSMUST00000178380 930 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm21405-201ENSMUST00000179024 930 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm27849-201ENSMUST00000183673 125 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm21191-201ENSMUST00000186484 930 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm29503-201ENSMUST00000191044 930 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm42646-201ENSMUST00000202233 914 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 AC159293.2-201ENSMUST00000222289 424 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Olfr467-201ENSMUST00000084756 927 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Ing3-201ENSMUST00000031680 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Usp49Q6P9L4 Gm44242-201ENSMUST00000204212 2721 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 A230107N01Rik-201ENSMUST00000180894 2348 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm25917-201ENSMUST00000104267 130 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm12077-201ENSMUST00000117049 364 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm12193-201ENSMUST00000117250 379 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm16423-201ENSMUST00000120078 947 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm15801-201ENSMUST00000120920 522 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm22636-201ENSMUST00000158142 275 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm24363-201ENSMUST00000158440 311 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm8783-201ENSMUST00000159764 522 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm17063-201ENSMUST00000168135 456 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm24303-201ENSMUST00000178237 126 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Mir7008-201ENSMUST00000184398 63 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm43148-201ENSMUST00000198237 520 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm36548-202ENSMUST00000200222 494 ntTSL 5 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 AC211878.6-201ENSMUST00000221896 358 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 CT025525.1-201ENSMUST00000226325 1054 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm5582-201ENSMUST00000075251 522 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm6104-201ENSMUST00000078030 603 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Mir298-201ENSMUST00000083476 82 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.48□□□□□ -1.37
Usp49Q6P9L4 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Gm44676-201ENSMUST00000208520 3055 ntBASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 AC124516.3-201ENSMUST00000221302 3613 ntBASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Qser1-201ENSMUST00000117237 8973 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Gm22372-201ENSMUST00000104589 136 ntBASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Gm13489-201ENSMUST00000121234 971 ntBASIC6.47□□□□□ -1.37
Usp49Q6P9L4 n-R5s19-201ENSMUST00000122793 120 ntBASIC6.47□□□□□ -1.37
Usp49Q6P9L4 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms