Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Snora35-201ENSMUST00000104579 128 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm22952-201ENSMUST00000116720 120 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm7927-201ENSMUST00000118818 880 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm15361-201ENSMUST00000119320 444 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Snora47-201ENSMUST00000157483 138 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm26069-201ENSMUST00000157497 277 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm2959-201ENSMUST00000169844 621 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm17121-201ENSMUST00000170414 847 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm4152-201ENSMUST00000172675 259 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm17222-201ENSMUST00000180135 847 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm18689-201ENSMUST00000203969 902 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm18598-201ENSMUST00000207724 597 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm44892-201ENSMUST00000208595 488 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 AC130547.1-201ENSMUST00000228079 1047 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm8412-201ENSMUST00000077493 440 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm24200-201ENSMUST00000082955 157 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Sp140Q6NSQ5 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Gm43386-201ENSMUST00000199654 4001 ntBASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Gm24434-201ENSMUST00000104081 132 ntBASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 n-R5s178-201ENSMUST00000104249 114 ntBASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Gm14943-201ENSMUST00000118056 546 ntBASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Gm8430-201ENSMUST00000119780 471 ntBASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Gm12308-201ENSMUST00000120440 389 ntBASIC6.1□□□□□ -1.43
Sp140Q6NSQ5 Gm12438-201ENSMUST00000122034 336 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 160.2 ms