Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC6.34□□□□□ -1.39
CiitaP79621 Gm19104-201ENSMUST00000198392 679 ntBASIC6.34□□□□□ -1.39
CiitaP79621 Gm9057-201ENSMUST00000198791 296 ntBASIC6.34□□□□□ -1.39
CiitaP79621 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.34□□□□□ -1.39
CiitaP79621 Gm43116-201ENSMUST00000199789 195 ntBASIC6.34□□□□□ -1.39
CiitaP79621 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CiitaP79621 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CiitaP79621 Gm17988-201ENSMUST00000208796 535 ntBASIC6.34□□□□□ -1.39
CiitaP79621 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.34□□□□□ -1.39
CiitaP79621 Gm33178-201ENSMUST00000212090 257 ntBASIC6.34□□□□□ -1.39
CiitaP79621 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.34□□□□□ -1.39
CiitaP79621 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.34□□□□□ -1.39
CiitaP79621 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC6.34□□□□□ -1.39
CiitaP79621 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.34□□□□□ -1.39
CiitaP79621 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CiitaP79621 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CiitaP79621 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.34□□□□□ -1.39
CiitaP79621 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CiitaP79621 Gm10705-201ENSMUST00000098980 461 ntBASIC6.34□□□□□ -1.39
CiitaP79621 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CiitaP79621 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CiitaP79621 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CiitaP79621 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CiitaP79621 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CiitaP79621 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CiitaP79621 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC6.34□□□□□ -1.4
CiitaP79621 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
CiitaP79621 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CiitaP79621 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.33□□□□□ -1.4
CiitaP79621 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CiitaP79621 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Gm7700-201ENSMUST00000120273 970 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Gm15187-201ENSMUST00000122329 264 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.33□□□□□ -1.4
CiitaP79621 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC6.33□□□□□ -1.4
CiitaP79621 Gm11716-201ENSMUST00000154414 470 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Gm6808-201ENSMUST00000162341 807 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CiitaP79621 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CiitaP79621 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Gm4410-201ENSMUST00000199349 686 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.33□□□□□ -1.4
CiitaP79621 Gm43456-201ENSMUST00000202519 457 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Gm20786-201ENSMUST00000212649 436 ntBASIC6.33□□□□□ -1.4
CiitaP79621 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC6.33□□□□□ -1.4
CiitaP79621 Gm8290-201ENSMUST00000218202 477 ntBASIC6.33□□□□□ -1.4
CiitaP79621 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.33□□□□□ -1.4
CiitaP79621 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.33□□□□□ -1.4
CiitaP79621 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.33□□□□□ -1.4
CiitaP79621 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CiitaP79621 n-R5s215-201ENSMUST00000082480 104 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CiitaP79621 Gm38377-201ENSMUST00000193253 3772 ntBASIC6.33□□□□□ -1.4
CiitaP79621 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CiitaP79621 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CiitaP79621 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CiitaP79621 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CiitaP79621 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CiitaP79621 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm23910-201ENSMUST00000104597 132 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm15786-201ENSMUST00000121079 450 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.32□□□□□ -1.4
CiitaP79621 Gm25227-201ENSMUST00000158204 112 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm17121-201ENSMUST00000170414 847 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Mir5110-201ENSMUST00000175537 87 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm17222-201ENSMUST00000180135 847 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm19791-201ENSMUST00000180398 859 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Mir7653-201ENSMUST00000184358 61 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Ighv3-2-201ENSMUST00000191842 349 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC6.32□□□□□ -1.4
CiitaP79621 Gm19596-201ENSMUST00000203685 739 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm5735-201ENSMUST00000207053 167 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.32□□□□□ -1.4
CiitaP79621 Gm10709-201ENSMUST00000213318 480 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.32□□□□□ -1.4
CiitaP79621 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.32□□□□□ -1.4
CiitaP79621 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms