Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Shmt1P50431 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.46□□□□□ -1.38
Shmt1P50431 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Shmt1P50431 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Shmt1P50431 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Shmt1P50431 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.45□□□□□ -1.38
Shmt1P50431 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm7189-201ENSMUST00000119811 429 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm11533-201ENSMUST00000120287 477 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm9208-201ENSMUST00000120468 948 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm8317-201ENSMUST00000121261 471 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm11925-201ENSMUST00000121375 535 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm9428-201ENSMUST00000127214 769 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm23225-201ENSMUST00000158121 114 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm7152-201ENSMUST00000163570 605 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Shmt1P50431 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm5430-201ENSMUST00000182525 915 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm27004-201ENSMUST00000183300 727 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Mir7685-201ENSMUST00000183555 62 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Mir6952-201ENSMUST00000185092 61 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm18382-201ENSMUST00000194394 582 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm44382-201ENSMUST00000198683 122 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm2040-201ENSMUST00000202979 289 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Shmt1P50431 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 AC126673.2-201ENSMUST00000221052 686 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm9237-201ENSMUST00000221499 548 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.45□□□□□ -1.38
Shmt1P50431 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Shmt1P50431 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Shmt1P50431 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Shmt1P50431 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm4994-201ENSMUST00000118379 2187 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Shmt1P50431 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm8569-201ENSMUST00000117630 647 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm12099-201ENSMUST00000118660 750 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm12308-201ENSMUST00000120440 389 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.44□□□□□ -1.38
Shmt1P50431 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm24551-201ENSMUST00000158645 92 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Shmt1P50431 Gm9597-201ENSMUST00000171913 602 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm19807-201ENSMUST00000173971 667 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Shmt1P50431 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Gm26923-201ENSMUST00000182615 996 ntBASIC6.44□□□□□ -1.38
Shmt1P50431 Mir7220-201ENSMUST00000183978 60 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms